Transcript: LINC01770:19

Basic information

LNCipedia transcript ID: LINC01770:19 
LNCipedia gene ID: LINC01770
Location (hg38): chr1:1428122-1430255
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1210 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000428781.1; RP4-758J18.9-001; OTTHUMT00000008137.1; NONHSAT000321
Alternative gene names: ENSG00000236239.1; RP4-758J18.9; OTTHUMG00000002914.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.9223 non-coding 
CPAT coding probability 12.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01770:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD65-2:1
4.0 lnc-ANKRD65-3:9
4.1 lnc-ANKRD65-3:9
5.0 lnc-ANKRD65-3:9
5.1 LINC01770:10
5.2 LINC01770:19