Transcript: LINC01772:3
Basic information
LNCipedia transcript ID: LINC01772:3
HGNC Gene Symbol: LINC01772
HGNC Full Gene Name:
long intergenic non-protein coding RNA 1772
Ensembl Gene ID:
ENSG00000226029
Ensembl Transcript ID:
ENST00000457898
Location (hg38): chr1:16460948-16468481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3245 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457898; ENST00000457898.1; RP4-798A10.2-001; OTTHUMT00000006685.1; NONHSAT001116
Alternative gene names: ENSG00000226029; RP4-798A10.2; ENSG00000226029.1; OTTHUMG00000002314.1; LINC01772
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| LINC01772:3 | no | no | no | no |
Available literature
- Wang (2017), Improved method for prioritization of disease associated lncRNAs based on ceRNA theory and functional genomics data., Oncotarget
- Ning (2014), SNP@lincTFBS: an integrated database of polymorphisms in human LincRNA transcription factor binding sites., PLoS ONE
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-NECAP2-1:1 |
| 3.1 | lnc-NECAP2-1:1 |
| 4.0 | lnc-NECAP2-1:1 |
| 4.1 | lnc-NECAP2-1:1 |
| 5.0 | lnc-NECAP2-1:1 |
| 5.1 | LINC01772:2 |
| 5.2 | LINC01772:3 |