Transcript: LINC01777:15

Basic information

LNCipedia transcript ID: LINC01777:15 
HGNC Gene Symbol: LINC01777    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1777
Ensembl Gene ID: ENSG00000235054
Ensembl Transcript ID: ENST00000633821
Location (hg38): chr1:4412161-4422877
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 579 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000633821.1
Alternative gene names: ENSG00000235054.3; RP5-1166F10.1; LINC01777


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.3776 non-coding 
CPAT coding probability 2.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01777:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AJAP1-4:8
4.1 lnc-AJAP1-4:8
5.0 lnc-AJAP1-4:8
5.1 LINC01777:6
5.2 LINC01777:15