Transcript: LINC01777:16

Basic information

LNCipedia transcript ID: LINC01777:16 
LNCipedia gene ID: LINC01777
Location (hg38): chr1:4412179-4424648
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1493 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000824; NONHSAT000578
Alternative gene names: XLOC_000033; linc-AJAP1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.7965 non-coding 
CPAT coding probability 10.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01777:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AJAP1-4:3
3.1 lnc-AJAP1-4:3
4.0 lnc-AJAP1-4:3
4.1 lnc-AJAP1-4:3
5.0 lnc-AJAP1-4:3
5.1 LINC01777:7
5.2 LINC01777:16