Transcript: LINC01780:15

Basic information

LNCipedia transcript ID: LINC01780:15 
LNCipedia gene ID: LINC01780
Location (hg38): chr1:119327414-119359951
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4784 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232650.1|MICT00000018398.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 42.5435 non-coding 
CPAT coding probability 3.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01780:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HAO2-1:9
5.0 lnc-HAO2-1:9
5.1 LINC01780:6
5.2 LINC01780:15