Transcript: LINC01781:15

Basic information

LNCipedia transcript ID: LINC01781:15 
LNCipedia gene ID: LINC01781
Location (hg38): chr1:80535760-80644295
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 254 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00002080
Alternative gene names: XLOC_000268; linc-LPHN2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -247.0678 non-coding 
CPAT coding probability 3.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01781:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LPHN2-1:3
3.1 lnc-LPHN2-1:3
4.0 lnc-LPHN2-1:3
4.1 lnc-LPHN2-1:3
5.0 lnc-LPHN2-1:3
5.1 LINC01781:6
5.2 LINC01781:15