Transcript: LINC01781:17

Basic information

LNCipedia transcript ID: LINC01781:17 
LNCipedia gene ID: LINC01781
RefSeq ID: NR_125942
Location (hg38): chr1:80641287-80646788
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 470 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125942; NR_125942.1
Alternative gene names: LOC101927412


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.6162 non-coding 
CPAT coding probability 8.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01781:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LPHN2-1:9
4.0 lnc-LPHN2-1:9
4.1 lnc-LPHN2-1:9
5.0 lnc-LPHN2-1:9
5.1 LINC01781:8
5.2 LINC01781:17