Transcript: LINC01781:18

Basic information

LNCipedia transcript ID: LINC01781:18 
LNCipedia gene ID: LINC01781
Location (hg38): chr1:80641288-80647149
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 701 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001004; NONHSAT004122
Alternative gene names: XLOC_000268; linc-LPHN2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.0101 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01781:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LPHN2-1:5
3.1 lnc-LPHN2-1:5
4.0 lnc-LPHN2-1:5
4.1 lnc-LPHN2-1:5
5.0 lnc-LPHN2-1:5
5.1 LINC01781:9
5.2 LINC01781:18