Transcript: LINC01782:7

Basic information

LNCipedia transcript ID: LINC01782:7 
HGNC Gene Symbol: LINC01782    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1782
Ensembl Gene ID: ENSG00000267204
Ensembl Transcript ID: ENST00000591212
RefSeq ID: NR_110694
Location (hg38): chr19:32102088-32105916
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2908 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT064180; ENST00000591212.1; NR_110694.1
Alternative gene names: ENSG00000267204.1; AC011518.1; LINC01782; LOC101927411


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.5259 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01782:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD27-3:2
4.0 lnc-ANKRD27-3:2
4.1 lnc-ANKRD27-3:2
5.0 lnc-ANKRD27-3:2
5.1 LINC01782:3
5.2 LINC01782:7