Transcript: LINC01783:10

Basic information

LNCipedia transcript ID: LINC01783:10 
LNCipedia gene ID: LINC01783
Location (hg38): chr1:16532540-16535010
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 693 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000427204; ENST00000427204.1; RP4-798A10.5-001; OTTHUMT00000007048.1; NONHSAT001135
Alternative gene names: ENSG00000241374; RP4-798A10.5; ENSG00000241374.1; OTTHUMG00000002491.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.5673 non-coding 
CPAT coding probability 11.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01783:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SPATA21-1:2
3.1 lnc-SPATA21-1:2
4.0 lnc-SPATA21-1:2
4.1 lnc-SPATA21-1:2
5.0 lnc-SPATA21-1:2
5.1 LINC01783:6
5.2 LINC01783:10