Transcript: LINC01785:7

Basic information

LNCipedia transcript ID: LINC01785:7 
HGNC Gene Symbol: LINC01785    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1785
Ensembl Gene ID: ENSG00000268038
Ensembl Transcript ID: ENST00000598042
RefSeq ID: NR_135233
Location (hg38): chr19:22615557-22623971
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1112 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT063812; ENST00000598042.1; NR_135233.1
Alternative gene names: ENSG00000268038.1; AC011516.2; LINC01785; LOC374890


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.9957 non-coding 
CPAT coding probability 8.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01785:7 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC024563.1-1:2
4.0 lnc-AC024563.1-1:2
4.1 lnc-AC024563.1-1:2
5.0 lnc-AC024563.1-1:2
5.1 LINC01785:3
5.2 LINC01785:7