Transcript: LINC01785:9

Basic information

LNCipedia transcript ID: LINC01785:9 
LNCipedia gene ID: LINC01785
Location (hg38): chr19:22615557-22623971
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1112 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000268038.1|ENST00000598042.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.9957 non-coding 
CPAT coding probability 4.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01785:9 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC024563.1-1:3
5.0 lnc-AC024563.1-1:3
5.1 LINC01785:5
5.2 LINC01785:9