Transcript: LINC01796:2

Basic information

LNCipedia transcript ID: LINC01796:2 
HGNC Gene Symbol: LINC01796    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1796
Ensembl Gene ID: ENSG00000277527
Ensembl Transcript ID: ENST00000611915
RefSeq ID: NR_135562
Location (hg38): chr2:102873339-102895722
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 709 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000611915.1; NR_135562.1
Alternative gene names: ENSG00000277527.1; AC007251.2; LINC01796; LOC105373518


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01796:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01796:2
5.1 LINC01796:2
5.2 LINC01796:2