Transcript: LINC01799:6

Basic information

LNCipedia transcript ID: LINC01799:6 
LNCipedia gene ID: LINC01799
RefSeq ID: NR_110169
Location (hg38): chr2:66904436-66971466
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 629 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110169; NR_110169.1
Alternative gene names: LOC101060019


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -194.226 non-coding 
CPAT coding probability 23.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01799:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEIS1-5:3
4.0 lnc-MEIS1-5:3
4.1 lnc-MEIS1-5:3
5.0 lnc-MEIS1-5:3
5.1 LINC01799:3
5.2 LINC01799:6