Transcript: LINC01801:20

Basic information

LNCipedia transcript ID: LINC01801:20 
LNCipedia gene ID: LINC01801
Location (hg38): chr19:34811834-34814345
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2512 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000561778.1; CTC-523E23.1-001; OTTHUMT00000431047.1
Alternative gene names: ENSG00000261754.1; CTC-523E23.1; OTTHUMG00000175768.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.6708 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01801:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF599-1:1
4.0 lnc-ZNF599-1:1
4.1 lnc-ZNF599-2:8
5.0 lnc-ZNF599-2:8
5.1 LINC01801:9
5.2 LINC01801:20