Transcript: LINC01801:21

Basic information

LNCipedia transcript ID: LINC01801:21 
LNCipedia gene ID: LINC01801
Ensembl Gene ID: ENSG00000261754
Ensembl Transcript ID: ENST00000561778
Location (hg38): chr19:34811589-34814345
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2757 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT064341; ENST00000561778.2
Alternative gene names: ENSG00000261754.2; CTC-523E23.1; AC008555.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.9194 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01801:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF599-1:2
4.0 lnc-ZNF599-1:2
4.1 lnc-ZNF599-2:9
5.0 lnc-ZNF599-2:9
5.1 LINC01801:10
5.2 LINC01801:21