Transcript: LINC01806:20

Basic information

LNCipedia transcript ID: LINC01806:20 
LNCipedia gene ID: LINC01806
Location (hg38): chr2:161244739-161247454
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 781 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227403.1|ENST00000436506.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -234.2856 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01806:20 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TANK-1:12
5.0 lnc-TANK-1:12
5.1 LINC01806:7
5.2 LINC01806:20