Transcript: LINC01808:12

Basic information

LNCipedia transcript ID: LINC01808:12 
LNCipedia gene ID: LINC01808
Location (hg38): chr2:19479234-19519704
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 476 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003591; NONHSAT069399
Alternative gene names: XLOC_001377; linc-RHOB-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -337.9891 non-coding 
CPAT coding probability 10.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01808:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RHOB-4:2
3.1 lnc-RHOB-6:2
4.0 lnc-RHOB-6:2
4.1 lnc-RHOB-6:2
5.0 lnc-RHOB-6:2
5.1 LINC01808:7
5.2 LINC01808:12