Transcript: LINC01808:13

Basic information

LNCipedia transcript ID: LINC01808:13 
LNCipedia gene ID: LINC01808
Location (hg38): chr2:19479234-19488595
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 387 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004705; NONHSAT069398
Alternative gene names: XLOC_001377; linc-RHOB-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.4027 non-coding 
CPAT coding probability 7.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01808:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RHOB-4:3
3.1 lnc-RHOB-6:3
4.0 lnc-RHOB-6:3
4.1 lnc-RHOB-6:3
5.0 lnc-RHOB-6:3
5.1 LINC01808:8
5.2 LINC01808:13