Transcript: LINC01811:18

Basic information

LNCipedia transcript ID: LINC01811:18 
LNCipedia gene ID: LINC01811
Location (hg38): chr3:34159373-34435319
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 316 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006813; NONHSAT088949
Alternative gene names: XLOC_002612; linc-ARPP21-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -244.9357 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01811:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDCD6IP-2:2
3.1 lnc-PDCD6IP-2:2
4.0 lnc-PDCD6IP-2:2
4.1 lnc-PDCD6IP-2:2
5.0 lnc-PDCD6IP-2:2
5.1 LINC01811:3
5.2 LINC01811:18