Transcript: LINC01811:20

Basic information

LNCipedia transcript ID: LINC01811:20 
HGNC Gene Symbol: LINC01811    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1811
Ensembl Gene ID: ENSG00000226320
Ensembl Transcript ID: ENST00000415991
Location (hg38): chr3:34159382-34361061
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 594 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000415991.2
Alternative gene names: ENSG00000226320.5; AC018359.1; LINC01811


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.0048 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01811:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PDCD6IP-2:12
4.1 lnc-PDCD6IP-2:12
5.0 lnc-PDCD6IP-2:12
5.1 LINC01811:5
5.2 LINC01811:20