Transcript: LINC01811:30

Basic information

LNCipedia transcript ID: LINC01811:30 
LNCipedia gene ID: LINC01811
Location (hg38): chr3:34551904-34563059
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 675 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005986; NONHSAT088962
Alternative gene names: XLOC_002612; linc-ARPP21-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.4336 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01811:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDCD6IP-2:9
3.1 lnc-PDCD6IP-2:9
4.0 lnc-PDCD6IP-2:9
4.1 lnc-PDCD6IP-2:9
5.0 lnc-PDCD6IP-2:9
5.1 LINC01811:15
5.2 LINC01811:30