Transcript: LINC01812:15

Basic information

LNCipedia transcript ID: LINC01812:15 
HGNC Gene Symbol: LINC01812    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1812
Ensembl Gene ID: ENSG00000237013
Ensembl Transcript ID: ENST00000457448
RefSeq ID: NR_110271
Location (hg38): chr2:67796054-67825562
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 725 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00003317; ENST00000457448; ENST00000457448.1; AC010987.6-001; OTTHUMT00000326402.1; NONHSAT071303; NR_110271; NR_110271.1
Alternative gene names: XLOC_002145; linc-SPRED2-6; ENSG00000237013; AC010987.6; ENSG00000237013.1; OTTHUMG00000152485.1; LINC01812; LOC101927701


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.3099 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01812:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1D-1:1
3.1 lnc-C1D-1:1
4.0 lnc-C1D-1:1
4.1 lnc-C1D-1:1
5.0 lnc-C1D-1:1
5.1 LINC01812:8
5.2 LINC01812:15