Transcript: LINC01813:8

Basic information

LNCipedia transcript ID: LINC01813:8 
LNCipedia gene ID: LINC01813
Location (hg38): chr2:56074654-56090376
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3469 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00002752
Alternative gene names: XLOC_002100; linc-EFEMP1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -117.0487 non-coding 
CPAT coding probability 0.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01813:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EFEMP1-2:2
3.1 lnc-EFEMP1-2:2
4.0 lnc-EFEMP1-2:2
4.1 lnc-EFEMP1-2:2
5.0 lnc-EFEMP1-2:2
5.1 LINC01813:5
5.2 LINC01813:8