Transcript: LINC01814:11

Basic information

LNCipedia transcript ID: LINC01814:11 
LNCipedia gene ID: LINC01814
Ensembl Gene ID: ENSG00000231435
Ensembl Transcript ID: ENST00000418358
Location (hg38): chr2:8543592-8575501
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1036 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00003197; ENST00000418358; ENST00000418358.1; AC011747.3-001; OTTHUMT00000323303.1; NONHSAT068996
Alternative gene names: XLOC_001975; linc-CMPK2-1; ENSG00000231435; AC011747.3; ENSG00000231435.1; OTTHUMG00000151623.1; AC011747.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.3666 non-coding 
CPAT coding probability 3.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01814:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIDINS220-3:1
3.1 lnc-KIDINS220-5:1
4.0 lnc-KIDINS220-5:1
4.1 lnc-KIDINS220-4:15
5.0 lnc-KIDINS220-4:15
5.1 LINC01814:6
5.2 LINC01814:11