Transcript: LINC01820:20

Basic information

LNCipedia transcript ID: LINC01820:20 
LNCipedia gene ID: LINC01820
Location (hg38): chr2:46392297-46394213
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 616 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228100.1|ENST00000418415.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -147.4465 non-coding 
CPAT coding probability 2.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01820:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP6V1E2-1:11
5.0 lnc-ATP6V1E2-1:11
5.1 LINC01820:9
5.2 LINC01820:20