Transcript: LINC01829:42

Basic information

LNCipedia transcript ID: LINC01829:42 
LNCipedia gene ID: LINC01829
Location (hg38): chr2:67175423-67215316
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 610 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236780.1|ENST00000414404.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -237.8592 non-coding 
CPAT coding probability 2.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01829:42 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1D-3:22
5.0 lnc-C1D-3:22
5.1 LINC01829:18
5.2 LINC01829:42