Transcript: LINC01829:45

Basic information

LNCipedia transcript ID: LINC01829:45 
LNCipedia gene ID: LINC01829
Location (hg38): chr2:67175317-67213768
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 757 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005171; NONHSAT071268
Alternative gene names: XLOC_002142; linc-SPRED2-11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.9996 non-coding 
CPAT coding probability 4.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01829:45 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1D-3:4
3.1 lnc-C1D-3:4
4.0 lnc-C1D-3:4
4.1 lnc-C1D-3:4
5.0 lnc-C1D-3:4
5.1 LINC01829:21
5.2 LINC01829:45