Transcript: LINC01830:11

Basic information

LNCipedia transcript ID: LINC01830:11 
LNCipedia gene ID: LINC01830
Ensembl Gene ID: ENSG00000228999
Ensembl Transcript ID: ENST00000430520
Location (hg38): chr2:21942178-21965551
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3010 bp
Exons: 2
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430520.2
Alternative gene names: ENSG00000228999.2; AC068490.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.0545 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01830:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-APOB-8:5
5.0 lnc-APOB-8:5
5.1 LINC01830:6
5.2 LINC01830:11