Transcript: LINC01833:37

Basic information

LNCipedia transcript ID: LINC01833:37 
LNCipedia gene ID: LINC01833
Location (hg38): chr2:44929864-44935651
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 756 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003269; NONHSAT070432
Alternative gene names: XLOC_002075; linc-PREPL-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.8038 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01833:37 no no no no

Available literature

  1. Chen (2016), Detection and Analysis of Wnt Pathway Related lncRNAs Expression Profile in Lung Adenocarcinoma., Pathol. Oncol. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SIX2-3:2
3.1 lnc-SIX2-3:4
4.0 lnc-SIX2-3:4
4.1 lnc-SIX2-3:4
5.0 lnc-SIX2-3:4
5.1 LINC01833:16
5.2 LINC01833:37