Transcript: LINC01837:20

Basic information

LNCipedia transcript ID: LINC01837:20 
LNCipedia gene ID: LINC01837
Location (hg38): chr19:32071614-32072090
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 354 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027298; NONHSAT064174
Alternative gene names: XLOC_013298; linc-TSHZ3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -184.959 non-coding 
CPAT coding probability 21.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01837:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD27-4:1
3.1 lnc-ANKRD27-4:1
4.0 lnc-ANKRD27-4:1
4.1 lnc-TSHZ3-3:7
5.0 lnc-TSHZ3-3:7
5.1 LINC01837:2
5.2 LINC01837:20