Transcript: LINC01837:22

Basic information

LNCipedia transcript ID: LINC01837:22 
HGNC Gene Symbol: LINC01837    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1837
Ensembl Gene ID: ENSG00000267489
Ensembl Transcript ID: ENST00000636649
Location (hg38): chr19:31937151-32072080
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1056 bp
Exons: 8
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636649.1
Alternative gene names: ENSG00000267489.3; CTC-360P9.4; LINC01837


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -110.2471 non-coding 
CPAT coding probability 5.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01837:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TSHZ3-3:9
5.0 lnc-TSHZ3-3:9
5.1 LINC01837:4
5.2 LINC01837:22