Transcript: LINC01837:23

Basic information

LNCipedia transcript ID: LINC01837:23 
LNCipedia gene ID: LINC01837
Location (hg38): chr19:31966899-32025995
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1149 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027297; NONHSAT064162
Alternative gene names: XLOC_013297; linc-TSHZ3-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.95 non-coding 
CPAT coding probability 24.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01837:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD27-5:1
3.1 lnc-ANKRD27-5:1
4.0 lnc-ANKRD27-5:1
4.1 lnc-TSHZ3-3:10
5.0 lnc-TSHZ3-3:10
5.1 LINC01837:5
5.2 LINC01837:23