Transcript: LINC01837:29

Basic information

LNCipedia transcript ID: LINC01837:29 
LNCipedia gene ID: LINC01837
Location (hg38): chr19:31965647-31980210
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 590 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027296; NONHSAT064159
Alternative gene names: XLOC_013297; linc-TSHZ3-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.2471 non-coding 
CPAT coding probability 4.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01837:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD27-5:3
3.1 lnc-ANKRD27-5:3
4.0 lnc-ANKRD27-5:3
4.1 lnc-TSHZ3-3:16
5.0 lnc-TSHZ3-3:16
5.1 LINC01837:11
5.2 LINC01837:29