Transcript: LINC01837:30

Basic information

LNCipedia transcript ID: LINC01837:30 
LNCipedia gene ID: LINC01837
Location (hg38): chr19:31965642-31966969
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 549 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT146975; ENST00000590021.1
Alternative gene names: ENSG00000267684.1; CTC-360P9.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.2471 non-coding 
CPAT coding probability 1.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01837:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD27-5:8
4.0 lnc-ANKRD27-5:8
4.1 lnc-TSHZ3-3:17
5.0 lnc-TSHZ3-3:17
5.1 LINC01837:12
5.2 LINC01837:30