Transcript: LINC01843:11

Basic information

LNCipedia transcript ID: LINC01843:11 
LNCipedia gene ID: LINC01843
RefSeq ID: NR_105045
Location (hg38): chr5:134506552-134509230
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1108 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_105045; NR_105045.1
Alternative gene names: LOC101927934


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.3275 non-coding 
CPAT coding probability 14.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01843:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHF15-1:3
4.0 lnc-PHF15-1:3
4.1 lnc-PHF15-1:3
5.0 lnc-PHF15-1:3
5.1 LINC01843:3
5.2 LINC01843:11