Transcript: LINC01852:17

Basic information

LNCipedia transcript ID: LINC01852:17 
LNCipedia gene ID: LINC01852
Location (hg38): chr15:38072018-38072925
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 908 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236914.3|ENST00000560198.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.5177 non-coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01852:17 no no no no

Available literature

  1. Chai (2016), Long noncoding RNA ENST00000434223 suppressed tumor progression in non-small cell lung cancer., Tumour Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RASGRP1-4:10
5.0 lnc-RASGRP1-4:10
5.1 LINC01852:6
5.2 LINC01852:17