Transcript: LINC01854:11

Basic information

LNCipedia transcript ID: LINC01854:11 
LNCipedia gene ID: LINC01854
Location (hg38): chr2:129235538-129318801
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9137 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000204460.3|MICT00000198857.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.4553 non-coding 
CPAT coding probability 27.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01854:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-POTEF-5:5
5.0 lnc-POTEF-5:5
5.1 LINC01854:2
5.2 LINC01854:11