Transcript: LINC01863:3

Basic information

LNCipedia transcript ID: LINC01863:3 
HGNC Gene Symbol: LINC01863    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1863
Ensembl Gene ID: ENSG00000253959
Ensembl Transcript ID: ENST00000523242
Location (hg38): chr5:173642519-173658194
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 494 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523242; ENST00000523242.1; CTB-43E15.1-001; OTTHUMT00000372783.1; NONHSAT105198
Alternative gene names: ENSG00000253959; CTB-43E15.1; ENSG00000253959.1; OTTHUMG00000163339.1; LINC01863


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.5711 non-coding 
CPAT coding probability 2.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01863:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CPEB4-3:1
3.1 lnc-CPEB4-3:1
4.0 lnc-CPEB4-3:1
4.1 lnc-CPEB4-3:1
5.0 lnc-CPEB4-3:1
5.1 LINC01863:2
5.2 LINC01863:3