Transcript: LINC01869:24

Basic information

LNCipedia transcript ID: LINC01869:24 
HGNC Gene Symbol: LINC01869    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1869
Ensembl Gene ID: ENSG00000180279
Ensembl Transcript ID: ENST00000635639
Location (hg38): chr19:50808874-50818668
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1047 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635639.1
Alternative gene names: ENSG00000180279.6; MGC45922; LINC01869


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.8237 non-coding 
CPAT coding probability 25.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01869:24 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC010325.1-1:8
4.1 lnc-AC010325.1-1:8
5.0 lnc-AC010325.1-1:8
5.1 LINC01869:9
5.2 LINC01869:24