Transcript: LINC01869:30

Basic information

LNCipedia transcript ID: LINC01869:30 
LNCipedia gene ID: LINC01869
Location (hg38): chr19:50817928-50818668
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 552 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT147050; ENST00000593632.1
Alternative gene names: ENSG00000180279.5; CTD-2568A17.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.0763 non-coding 
CPAT coding probability 26.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01869:30 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC010325.1-1:7
4.0 lnc-AC010325.1-1:7
4.1 lnc-AC010325.1-1:7
5.0 lnc-AC010325.1-1:7
5.1 LINC01869:15
5.2 LINC01869:30