Transcript: LINC01876:20

Basic information

LNCipedia transcript ID: LINC01876:20 
HGNC Gene Symbol: LINC01876    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1876
Ensembl Gene ID: ENSG00000226383
Ensembl Transcript ID: ENST00000635799
Location (hg38): chr2:156011530-156254929
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 884 bp
Exons: 5
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635799.1
Alternative gene names: ENSG00000226383.6; AC093375.1; LINC01876


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.0024 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01876:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NR4A2-2:10
5.0 lnc-NR4A2-2:10
5.1 LINC01876:7
5.2 LINC01876:20