Transcript: LINC01879:6

Basic information

LNCipedia transcript ID: LINC01879:6 
LNCipedia gene ID: LINC01879
Location (hg38): chr18:76690089-76691542
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1454 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT059951; ENST00000600589.1
Alternative gene names: ENSG00000229055.3; AC034110.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.0012 non-coding 
CPAT coding probability 17.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01879:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF236-2:2
4.0 lnc-ZNF236-2:2
4.1 lnc-ZNF236-2:2
5.0 lnc-ZNF236-2:2
5.1 LINC01879:3
5.2 LINC01879:6