Transcript: LINC01884:7

Basic information

LNCipedia transcript ID: LINC01884:7 
LNCipedia gene ID: LINC01884
Location (hg38): chr2:22536390-22539830
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 567 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004716; NONHSAT069518
Alternative gene names: XLOC_001393; linc-KLHL29-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -615.7434 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01884:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLHL29-2:1
3.1 lnc-KLHL29-2:1
4.0 lnc-KLHL29-2:1
4.1 lnc-KLHL29-2:1
5.0 lnc-KLHL29-2:1
5.1 LINC01884:3
5.2 LINC01884:7