Transcript: LINC01894:17

Basic information

LNCipedia transcript ID: LINC01894:17 
HGNC Gene Symbol: LINC01894    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1894
Ensembl Gene ID: ENSG00000264345
Ensembl Transcript ID: ENST00000582697
Location (hg38): chr18:24954207-24987665
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 386 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000582697.1; RP11-958F21.1-001; OTTHUMT00000446768.1; NONHSAT058722
Alternative gene names: ENSG00000264345.1; RP11-958F21.1; OTTHUMG00000179507.1; LINC01894


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.1866 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01894:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF521-1:2
4.0 lnc-ZNF521-1:2
4.1 lnc-ZNF521-1:2
5.0 lnc-ZNF521-1:2
5.1 LINC01894:9
5.2 LINC01894:17