Transcript: LINC01899:10

Basic information

LNCipedia transcript ID: LINC01899:10 
LNCipedia gene ID: LINC01899
Location (hg38): chr18:71782034-71787006
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 264 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026551; NONHSAT059800
Alternative gene names: XLOC_012876; linc-RTTN-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -175.0773 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01899:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CBLN2-1:1
3.1 lnc-CBLN2-3:1
4.0 lnc-CBLN2-4:6
4.1 lnc-CBLN2-4:6
5.0 lnc-CBLN2-4:6
5.1 LINC01899:3
5.2 LINC01899:10