Transcript: LINC01899:13

Basic information

LNCipedia transcript ID: LINC01899:13 
HGNC Gene Symbol: LINC01899    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1899
Ensembl Gene ID: ENSG00000265352
Ensembl Transcript ID: ENST00000583756
RefSeq ID: NR_126324
Location (hg38): chr18:71732615-71782226
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 575 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT059796; ENST00000583756.1; NR_126324.1
Alternative gene names: ENSG00000265352.1; RP11-723G8.2; LINC01899; LOC102724913


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.1919 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01899:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBLN2-4:4
4.0 lnc-CBLN2-4:4
4.1 lnc-CBLN2-4:4
5.0 lnc-CBLN2-4:4
5.1 LINC01899:6
5.2 LINC01899:13