Transcript: LINC01901:5

Basic information

LNCipedia transcript ID: LINC01901:5 
LNCipedia gene ID: LINC01901
Location (hg38): chr18:39841175-39876395
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 896 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026204; NONHSAT059038
Alternative gene names: XLOC_012826; linc-CELF4-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.2947 non-coding 
CPAT coding probability 2.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01901:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CELF4-8:1
3.1 lnc-CELF4-8:1
4.0 lnc-CELF4-8:1
4.1 lnc-CELF4-8:1
5.0 lnc-CELF4-8:1
5.1 LINC01901:3
5.2 LINC01901:5