Transcript: LINC01903:3

Basic information

LNCipedia transcript ID: LINC01903:3 
HGNC Gene Symbol: LINC01903    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1903
Ensembl Gene ID: ENSG00000265555
Ensembl Transcript ID: ENST00000580659
Location (hg38): chr18:67808505-67814822
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2149 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000580659.1; RP11-638L3.3-001; OTTHUMT00000442420.1; NONHSAT059725
Alternative gene names: ENSG00000265555.1; RP11-638L3.3; OTTHUMG00000178543.1; LINC01903


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.4694 non-coding 
CPAT coding probability 24.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01903:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DSEL-3:1
4.0 lnc-DSEL-3:1
4.1 lnc-DSEL-3:1
5.0 lnc-DSEL-3:1
5.1 LINC01903:2
5.2 LINC01903:3