Transcript: LINC01909:14

Basic information

LNCipedia transcript ID: LINC01909:14 
HGNC Gene Symbol: LINC01909    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1909
Ensembl Gene ID: ENSG00000266258
Ensembl Transcript ID: ENST00000583247
Location (hg38): chr18:70336448-70352119
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 423 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT059772; ENST00000583247.1
Alternative gene names: ENSG00000266258.1; RP11-41O4.1; LINC01909


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.1784 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01909:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SOCS6-1:6
4.0 lnc-SOCS6-1:6
4.1 lnc-SOCS6-1:6
5.0 lnc-SOCS6-1:6
5.1 LINC01909:7
5.2 LINC01909:14